Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901544.1_cds_XP_016451587.1_45918
CDS Infomation

[gene=LOC107776230] [db_xref=GeneID:107776230] [protein=probable starch synthase 4, chloroplastic/amyloplastic] [partial=5'] [protein_id=XP_016451587.1] [location=join(<6..50,150..225,321..505,582..776,882..953,1908..2117,13139..13264,14339..14488,14594..14655,14751..14826,15015..15191)] [gbkey=CDS]
Sequence

CCTAAATATGATTGTATGCAGTATGAGTCAATTAAAGACATGAAGGCCTTAGATGTGGTT
GTTGAGTCTTACTTTGATGGTCGGTTATACAAAAATAAGATCTGGACGGGCACTGTTGAA
GGCCTTCCTGTCTATTTCATTGAGCCTCAACATCCTGGTAAATTCTTCGGGAGAGGACAA
CTTTATGGGGAGCACGATGATTTCAAACGATTTTCATTCTTTAGCAGGGTAGCACTTGAG
TTACTACTTCATGCTGAAAAGAAACCAGATATAATTCATTGCCATGATTGGCAAACAGCT
TTTGTTGCACCACTTTATTGGGATCTATATGTGCCAAAAGGATTGGACTCAGCGAGGATT
TGCTTTACATGCCATAATTTTGAGTATCAAGGGACTGCACCAGCATCAGAATTAACATCT
TGCGGTCTTGATGCTTATCACTTGAACAGACCAGACAGGATGCAGGACAATTCCGCAAAT
GATAGAATAAATTCCGTGAAGGGTGCAATTGTGTTTTCTAACATTGTTACCACAGTTTCA
CCAACTTATGCTCAAGAGGTCCGGACTGCTCAGGGAGGAAAAGGACTTCATGCAACAATT
AACTCCCACTCTAAGAAATTTGTTGGAATTCTGAATGGAATTGATACTGATGCTTGGAAT
CCTGCTTCTGATAATTTTCTTAAGGTCCAGTATAGTGCCAGTGACATAGAGGGGAAATTA
GAAAATAAAGAAGCTTTAAGAAGACTTCTAGGGCTCTCTTCTTCTGAAATTAGACGACCA
TTGGTTGGTTGCATAACAAGACTGGTTCCTCAAAAGGGTGTGCATCTTATTAGACATGCC
ATATATAGGACTTTGGAGTTGGGAGGTCAATTTGTTCTTCTTGGTTCTAGTCCAGTGCCA
CATATTCAGAGGGAGTTTGAGGATATCAGAAACCATTTCCAAAATCACGAACATGCTCGG
TTGGTATTAAAGTATGATGAGGCTCTTTCCCATTTGATTTATGCAGCATCTGACATGCTT
ATCATCCCATCCATCTTTGAGCCTTGCGGCCTTACTCAGATGATAGCGATGAGATATGGG
TCTATACCAATAGCTAGGAAAACAGGGGGCTTGAATGATAGTGTTTTCGATGTTGACGAT
GACACAATCCCAGATCAGTTTAGAAATGGATTTACGTTTGTGACTGCTGATGAACAGGGA
TTCAACAACGCCTTGGAACGTGCATTTAACTACTACATGAACAATGCTGAGACTTGGAAA
GAGCTGGTTCAGAAGGACATGAACATAGATTTTAGTTGGGATTCGTCAGCATCACAATAT
GAAGAACTTTACGATAAGGCTGTTTTGAGGGCAAGAACTGCAAGTCGTAGTTGA

Peptide Sequence

PEP ID

XP_016451587.1
PEP Infomation

PREDICTED: probable starch synthase 4, chloroplastic/amyloplastic, partial [Nicotiana tabacum]
Sequence

PKYDCMQYESIKDMKALDVVVESYFDGRLYKNKIWTGTVEGLPVYFIEPQHPGKFFGRGQ
LYGEHDDFKRFSFFSRVALELLLHAEKKPDIIHCHDWQTAFVAPLYWDLYVPKGLDSARI
CFTCHNFEYQGTAPASELTSCGLDAYHLNRPDRMQDNSANDRINSVKGAIVFSNIVTTVS
PTYAQEVRTAQGGKGLHATINSHSKKFVGILNGIDTDAWNPASDNFLKVQYSASDIEGKL
ENKEALRRLLGLSSSEIRRPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLGSSPVP
HIQREFEDIRNHFQNHEHARLVLKYDEALSHLIYAASDMLIIPSIFEPCGLTQMIAMRYG
SIPIARKTGGLNDSVFDVDDDTIPDQFRNGFTFVTADEQGFNNALERAFNYYMNNAETWK
ELVQKDMNIDFSWDSSASQYEELYDKAVLRARTASRS

Transcript Sequence

Gene sequence data has not been registered.